MedKoo Cat#: 465598 | Name: OGDA
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Description:

WARNING: This product is for research use only, not for human or veterinary use.

OGDA is a green fluorescent D-amino acid. Suitable for labeling peptidoglycans in live bacteria. OGDA is efficiently incorporated into the peptidoglycans of gram-positive and some gram-negative bacteria. Compatible with STED microscopy, OGDA labelled bacteria can be imaged by super-resolution stimulated emission depletion (STED) at a resolution below 100 nm. Photo-stable. Excitation/emission λ ~501/526 nm.

Chemical Structure

OGDA
OGDA
CAS#unknown

Theoretical Analysis

MedKoo Cat#: 465598

Name: OGDA

CAS#: unknown

Chemical Formula: C24H16F2N2O8

Exact Mass: 498.0875

Molecular Weight: 498.39

Elemental Analysis: C, 57.84; H, 3.24; F, 7.62; N, 5.62; O, 25.68

Price and Availability

Size Price Availability Quantity
5mg USD 510.00 2 Weeks
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Related CAS #
No Data
Synonym
OGDA; OG fluorescent D-amino acid; OG FDAA; OGFDAA; OG-FDAA;
IUPAC/Chemical Name
(R)-2-amino-3-(2',7'-difluoro-3',6'-dihydroxy-3-oxo-3H-spiro[isobenzofuran-1,9'-xanthene]-6-carboxamido)propanoic acid
InChi Key
RFRUFDKIAPOSBS-MRXNPFEDSA-N
InChi Code
InChI=1S/C24H16F2N2O8/c25-14-4-12-19(6-17(14)29)35-20-7-18(30)15(26)5-13(20)24(12)11-3-9(1-2-10(11)23(34)36-24)21(31)28-8-16(27)22(32)33/h1-7,16,29-30H,8,27H2,(H,28,31)(H,32,33)/t16-/m1/s1
SMILES Code
O=C(C1=CC=C(C(OC23C4=C(C=C(C(F)=C4)O)OC5=C3C=C(F)C(O)=C5)=O)C2=C1)NC[C@@H](N)C(O)=O
Appearance
Solid powder
Purity
>98% (or refer to the Certificate of Analysis)
Shipping Condition
Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.
Storage Condition
Dry, dark and at 0 - 4 C for short term (days to weeks) or -20 C for long term (months to years).
Solubility
To be determined
Shelf Life
>2 years if stored properly
Drug Formulation
To be determined
Stock Solution Storage
0 - 4 C for short term (days to weeks), or -20 C for long term (months).
HS Tariff Code
2934.99.9001
More Info
Solvent mg/mL mM
Solubility
DMSO 49.8 100.00
Note: There can be variations in solubility for the same chemical from different vendors or different batches from the same vendor. The following factors can affect the solubility of the same chemical: solvent used for crystallization, residual solvent content, polymorphism, salt versus free form, degree of hydration, solvent temperature. Please use the solubility data as a reference only. Warming and sonication will facilitate dissolving. Still have questions? Please contact our Technical Support scientists.

Preparing Stock Solutions

The following data is based on the product molecular weight 498.39 Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which will affect the solvent volumes required to prepare stock solutions.

Recalculate based on batch purity %
Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.15 mL 5.76 mL 11.51 mL
5 mM 0.23 mL 1.15 mL 2.3 mL
10 mM 0.12 mL 0.58 mL 1.15 mL
50 mM 0.02 mL 0.12 mL 0.23 mL
1: Söderström B, Ruda A, Widmalm G, Daley DO. An OregonGreen488-labelled d-amino acid for visualizing peptidoglycan by super-resolution STED nanoscopy. Microbiology (Reading). 2020 Dec;166(12):1129-1135. doi: 10.1099/mic.0.000996. PMID: 33237852.