MedKoo Cat#: 558917 | Name: Cyanine5.5 DBCO (PF6 salt)
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Description:

WARNING: This product is for research use only, not for human or veterinary use.

Strain promoted alkyne azide cycloaddition (spAAc) between strained cycloalkynes and azides is a useful bioconjugation method that eliminates the need for copper catalyst necessary for classical CuAAc Click chemistry. Cyanine5.5 DBCO is a cyclooctyne product containing Cyanine5.5 fluorescent dye. This fluorophore is used in bioimaging, biodistribution studies, and microscopy. Cyanine5.5 DBCO can be used to conjugate the fluorophore with various azides.

Chemical Structure

Cyanine5.5 DBCO (PF6 salt)
Cyanine5.5 DBCO (PF6 salt)
CAS#2643308-61-4 (PF6 salt)

Theoretical Analysis

MedKoo Cat#: 558917

Name: Cyanine5.5 DBCO (PF6 salt)

CAS#: 2643308-61-4 (PF6 salt)

Chemical Formula: C61H63F6N4O2P

Exact Mass: 1028.4593

Molecular Weight: 1029.16

Elemental Analysis: C, 71.19; H, 6.17; F, 11.08; N, 5.44; O, 3.11; P, 3.01

Price and Availability

Size Price Availability Quantity
5mg USD 550.00 2 Weeks
10mg USD 850.00 2 Weeks
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Synonym
DBCO-Cy5.5; Cyanine5.5 DBCO; Cyanine 5.5 DBCO; Cyanine-5.5- DBCO; Cy5.5 DBCO; Cy 5.5 DBCO; Cy5.5-DBCO; Dibenzocyclooctyne-Cy5.5
IUPAC/Chemical Name
N-[6-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-6-oxohexyl]-6-[1,1-dimethyl-2-[5-(1,1,3-trimethylbenzo[e]indol-3-ium-2-yl)penta-2,4-dienylidene]benzo[e]indol-3-yl]hexanamide;hexafluorophosphate
InChi Key
CICHRHLVMUNIGJ-UHFFFAOYSA-O
InChi Code
InChI=1S/C61H62N4O2.F6P/c1-60(2)54(63(5)52-39-37-45-24-15-18-28-49(45)58(52)60)31-9-6-10-32-55-61(3,4)59-50-29-19-16-25-46(50)38-40-53(59)64(55)42-22-8-11-33-56(66)62-41-21-7-12-34-57(67)65-43-48-27-14-13-23-44(48)35-36-47-26-17-20-30-51(47)65;1-7(2,3,4,5)6/h6,9-10,13-20,23-32,37-40H,7-8,11-12,21-22,33-34,41-43H2,1-5H3;/q;-1/p+1
SMILES Code
CC1(C(=[N+](C2=C1C3=CC=CC=C3C=C2)C)C=CC=CC=C4C(C5=C(N4CCCCCC(=O)NCCCCCC(=O)N6CC7=CC=CC=C7C#CC8=CC=CC=C86)C=CC9=CC=CC=C95)(C)C)C.F[P-](F)(F)(F)(F)F
Appearance
Solid powder
Purity
>95% (or refer to the Certificate of Analysis)
Shipping Condition
Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.
Storage Condition
Dry, dark and at 0 - 4 C for short term (days to weeks) or -20 C for long term (months to years).
Solubility
Soluble in DMSO
Shelf Life
>3 years if stored properly
Drug Formulation
This drug may be formulated in DMSO
Stock Solution Storage
0 - 4 C for short term (days to weeks), or -20 C for long term (months).
HS Tariff Code
2934.99.9001
More Info

Preparing Stock Solutions

The following data is based on the product molecular weight 1,029.16 Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which will affect the solvent volumes required to prepare stock solutions.

Recalculate based on batch purity %
Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.15 mL 5.76 mL 11.51 mL
5 mM 0.23 mL 1.15 mL 2.3 mL
10 mM 0.12 mL 0.58 mL 1.15 mL
50 mM 0.02 mL 0.12 mL 0.23 mL