1: Li Y, Song Y, Zhao L, Gaidosh G, Laties AM, Wen R. Direct labeling and visualization of blood vessels with lipophilic carbocyanine dye DiI. Nat Protoc. 2008;3(11):1703-8. doi: 10.1038/nprot.2008.172. PMID: 18846097; PMCID: PMC2811090.
2: Patlolla PR, Desai N, Gupta S, Datta B. Interaction of a dimeric carbocyanine dye aggregate with bovine serum albumin in non-aggregated and aggregated forms. Spectrochim Acta A Mol Biomol Spectrosc. 2019 Feb 15;209:256-263. doi: 10.1016/j.saa.2018.10.048. Epub 2018 Oct 30. PMID: 30414574.
3: Konno A, Matsumoto N, Okazaki S. Improved vessel painting with carbocyanine dye-liposome solution for visualisation of vasculature. Sci Rep. 2017 Aug 30;7(1):10089. doi: 10.1038/s41598-017-09496-4. PMID: 28855543; PMCID: PMC5577039.
4: Steffen FD, Sigel RK, Börner R. An atomistic view on carbocyanine photophysics in the realm of RNA. Phys Chem Chem Phys. 2016 Oct 26;18(42):29045-29055. doi: 10.1039/c6cp04277e. PMID: 27783069.
5: Carradori D, Barreau K, Eyer J. The carbocyanine dye DiD labels in vitro and in vivo neural stem cells of the subventricular zone as well as myelinated structures following in vivo injection in the lateral ventricle. J Neurosci Res. 2016 Feb;94(2):139-48. doi: 10.1002/jnr.23694. Epub 2015 Nov 14. PMID: 26566852.
6: Ye Y, Bloch S, Achilefu S. Polyvalent carbocyanine molecular beacons for molecular recognitions. J Am Chem Soc. 2004 Jun 30;126(25):7740-1. doi: 10.1021/ja049441z. PMID: 15212497.
7: Heilemann M, Margeat E, Kasper R, Sauer M, Tinnefeld P. Carbocyanine dyes as efficient reversible single-molecule optical switch. J Am Chem Soc. 2005 Mar 23;127(11):3801-6. doi: 10.1021/ja044686x. PMID: 15771514.
8: Makarenko IG. Prenatal carbocyanine dye tracing of septo-hypothalamic connections. Brain Res. 2007 Jan 26;1130(1):38-47. doi: 10.1016/j.brainres.2006.10.080. Epub 2006 Dec 14. PMID: 17174282.
9: Ye Y, Bloch S, Kao J, Achilefu S. Multivalent carbocyanine molecular probes: synthesis and applications. Bioconjug Chem. 2005 Jan-Feb;16(1):51-61. doi: 10.1021/bc049790i. PMID: 15656575.
10: Honig MG, Hume RI. Dil and diO: versatile fluorescent dyes for neuronal labelling and pathway tracing. Trends Neurosci. 1989 Sep;12(9):333-5, 340-1. PMID: 2480673.
11: Usama SM, Thompson T, Burgess K. Productive Manipulation of Cyanine Dye π-Networks. Angew Chem Int Ed Engl. 2019 Jul 1;58(27):8974-8976. doi: 10.1002/anie.201902956. Epub 2019 May 24. PMID: 31124257; PMCID: PMC7027957.
12: Andrade JPS, Oliveira CP, Tovar AMF, Mourão PAS, Vilanova E. A color-code for glycosaminoglycans identification by means of polyacrylamide gel electrophoresis stained with the cationic carbocyanine dye Stains-all. Electrophoresis. 2018 Feb;39(4):666-669. doi: 10.1002/elps.201700391. Epub 2017 Nov 29. PMID: 29105785.
13: Volnoukhin M, Brandhorst BP. Multispectral labeling of embryonic cells with lipophilic carbocyanine dyes. Mol Reprod Dev. 2015 Jul-Aug;82(7-8):619-24. doi: 10.1002/mrd.22477. Epub 2015 Mar 27. PMID: 25820691.
14: Jędrzejewska B, Bajorek A, Moraczewska J. Interaction of carbocyanine dyes with DNA: synthesis and spectroscopic studies. Appl Spectrosc. 2013 Jun;67(6):672-80. doi: 10.1366/12-06887. PMID: 23735253.
15: Chazotte B. Labeling membranes with carbocyanine dyes (DiIs) as phospholipid analogs. Cold Spring Harb Protoc. 2011 Jan 1;2011(1):pdb.prot5555. doi: 10.1101/pdb.prot5555. PMID: 21205855.
16: Zhang Z, Berezin MY, Kao JL, d'Avignon A, Bai M, Achilefu S. Near-infrared dichromic fluorescent carbocyanine molecules. Angew Chem Int Ed Engl. 2008;47(19):3584-7. doi: 10.1002/anie.200800475. PMID: 18386274.
17: Sinha SH, Owens EA, Feng Y, Yang Y, Xie Y, Tu Y, Henary M, Zheng YG. Synthesis and evaluation of carbocyanine dyes as PRMT inhibitors and imaging agents. Eur J Med Chem. 2012 Aug;54:647-59. doi: 10.1016/j.ejmech.2012.06.017. Epub 2012 Jun 21. PMID: 22749641; PMCID: PMC4151304.
18: Cruz C, Boto RE, Drzazga AK, Almeida P, Queiroz JA. NMR screening of new carbocyanine dyes as ligands for affinity chromatography. J Mol Recognit. 2014 Apr;27(4):197-204. doi: 10.1002/jmr.2351. PMID: 24591177.
19: Zhao N, Zhang C, Zhao Y, Bai B, An J, Zhang H, Wu JB, Shi C. Optical imaging of gastric cancer with near-infrared heptamethine carbocyanine fluorescence dyes. Oncotarget. 2016 Aug 30;7(35):57277-57289. doi: 10.18632/oncotarget.10031. PMID: 27329598; PMCID: PMC5302988.
20: Yang H, Mao H, Wan Z, Zhu A, Guo M, Li Y, Li X, Wan J, Yang X, Shuai X, Chen H. Micelles assembled with carbocyanine dyes for theranostic near-infrared fluorescent cancer imaging and photothermal therapy. Biomaterials. 2013 Dec;34(36):9124-33. doi: 10.1016/j.biomaterials.2013.08.022. Epub 2013 Sep 2. PMID: 24008037.